Publications

Publications resulting from this project

2025

1. Hazelgrove, B., Matter, L., Raos, B., Harland, B., Cheng, L., Asplund, M., Svirskis, D. (2025). "Electrochemical impedance spectroscopy in vivo for neurotechnology and bioelectronics", Nature Reviews Electrical Engineering 2, 1-15, doi: https://doi.org/10.1038/s44287-024-00126-6

2. Küçükoğlu, B., Rueckauer, B., de Ruyter van Steveninck, J., van der Grinten, M., Güçlütürk, Y., Roelfsema, P.R., Güçlü, U., van Gerven, M. (2025). "End-to-end Learning of Safe Stimulation Parameters for Cortical Neuroprosthetic Vision." bioRxiv 2025.01.23.634543; doi: https://doi.org/10.1101/2025.01.23.634543 

3. Küçükoğlu, B., Soo, L., Leeftink, D., Grani, F., Soto Sanchez, C., Güçlü, U., van Gerven, M., Fernandez, E. (2025). "Bayesian optimization of cortical neuroprosthetic vision using perceptual feedback." bioRxiv 2025.01.24.634528; doi:https://doi.org/10.1101/2025.01.24.634 

4. Küçükoğlu, B., Dalm, S., van Gerven, M.  (2025). Decorrelated Soft Actor-Critic for Efficient Deep Reinforcement Learning." arXiv preprint, https://doi.org/10.48550/arXiv.2501.19133 

5. Papale, P., Wang, F., Self, M.W. and Roelfsema, P.R. (2025) "An extensive dataset of spiking activity to reveal the syntax of the ventral stream". Neuron 113, 1-15, doi: https://doi.org/10.1016/j.neuron.2024.12.003 

2024

1. Orlemann, C., Boehler, C., Kooijmans, R. N., Li, B., Asplund, M., Roelfsema, P. R., “Flexible Polymer Electrodes for Stable Prosthetic Visual Perception in Mice”, Advanced Healthcare Materials, 2023, 20, 036039, https://doi.org/10.1002/adhm.202304169 

2. de Ruyter van Steveninck, J., Nipshagen, M., van Gerven, M., Güçlü, U., Güçlüturk, Y., van Wezel, R., "Gaze-contingent processing improves mobility, scene recognition and visual search in simulated head-steered prosthetic vision", 2024, 21, 026037, https://iopscience.iop.org/article/10.1088/1741-2552/ad357d/meta.

3. Wang, F., Chen, X. and Roelfsema, P.R. (2024) "Comparison of electrical microstimulation artifact removal methods for high-channel count prostheses." J. Neurosci. Meth. 408, 110169. https://doi.org/10.1016/j.jneumeth.2024.110169

4. van der Grinten, M., de Ruyter van Steveninck, J., Lozano, A., Pijnacker, L., Rückauer, B. Roelfsema, P.R., van Gerven, M., van Wezel, R., Güçlü, U., and Güçlütürk, Y. (2024) "Biologically plausible phosphene simulation for the differentiable optimization of visual cortical prostheses". ELife, https://doi.org/10.7554/eLife.85812  

5. van Beest, E.H., Abdelwahab, M.A.O, Cazemier, J.L., Baltira, C., Maes, M.C., Peri, B.D., Self, M.W., Willuhn, I., Roelfsema, P.R. (2024) "The direct and indirect pathways of the basal ganglia antagonistically influence cortical activity and perceptual decisions", iScience, doi: https://doi.org/10.1016/j.isci.2024.110753 

6. Dijksterhuis, D.E., Self, M.W., Possel, J.K., Peters, J.C., van Straaten, E.C.W., Idema, S., Baaijen, J.C., van der Salm, S.M.A., Aarnoutse, E.J., van Klink, N.C.E., van Eijsden, P., Hanslmayr, S., Chelvarajah, R., Roux, F., Kolibius, L.D., Sawlani, V., Rollings, D.T., Dehaene, S., Roelfsema, P.R. (2024), "Pronouns reactivate conceptual representations in human hippocampal neurons.", Science 385, 1478-1484, doi: https://doi.org/10.1126/science.adr2813 

7. Storm, J.F., Klink, P.C., Aru, J., Senn, W., Goebel, R., Pigorini, A., Avanzini, P., Vanduffel, W., Roelfsema, P.R., Massimini, M., Larkum, M., Pennartz, C.M.A. (2024), "An integrative, multiscale view on neural theories of consciousness", Neuron 112, 1-22, doi: https://doi.org/10.1016/j.neuron.2024.02.004 

8. Lewis, C.M., Boehler, C., Liljemalm, R., Fries, P., Stieglitz, T. and Asplund, M. (2024) "Recording Quality Is Systematically Related to Electrode Impedance", Adv Healthc Mater, 2024, e2303401, doi: https://doi.org/10.1002/adhm.202303401

9. Papale, P., Zuiderbaan, W., Teeuwen, R.R.M., Gilhuis, A., Self, M.W., Roelfsema, P.R. and Dumoulin, S.O. (2024) "V1 neurons are tuned to perceptual borders in natural scenes", Proc. Natl. Acad. Sci. USA 121, doi: https://doi.org/10.1073/pnas.2221623121 

10. Küçükoğlu, B., Borkent, W., Rueckauer, B., Ahmad, N., Güçlü, U., van Gerven, M. (2024). "Efficient Deep Reinforcement Learning with Predictive Processing Proximal Policy Optimization.", Neurons, Behavior, Data analysis, and Theory. 10.51628/001c.123366. https://doi.org/10.51628/001c.123366

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2023

1. Chen, C., Wang, C., R. Kooijmans, R.,  Klink, P.C., Boehler, C., Asplund,  M., Roelfsema, P. R., “Chronic stability of a neuroprosthesis comprising multiple adjacent Utah arrays in monkeys”, J. Neural Eng., 2023, 20, 036039, https://doi.org/10.1088/1741-2552/ace07e.

2. Roelfsema, P.R. “Solving the binding problem: assemblies form when neurons enhance their firing rate – they don’t need to oscillate or synchronize”. Neuron, 111, 1003-1019, 2023. https://doi.org/10.1016/j.neuron.2023.03.016 

3. Rueckauer, B. and van Gerven, M. "An In-Silico Framework for Modeling Optimal Control of Neural Systems", Frontiers in Neuroscience 17: 332, 2023, doi: 10.3389/fnins.2023.1141884.

4. Odenthal, M., Claar, V., Paul, O., Ruther, P. "Hierarchical Bonding Yield Test Structure for Flexible High Channel-Count Neural Probes Interfacing ASIC Chips", 2023 IEEE 36th International Conference on Micro Electro Mechanical Systems Conference (MEMS), Jan. 15-19 2023, Munich, Germany, pp. 409-412. (MEMS 23 Best Student Paper Finalist - Poster), doi: 10.1109/MEMS49605.2023.10052500.

5. Sharma, K., Boehler, C., Saeed, A., Paul, O., Asplund, M., Ruther, P. "New Wafer-Level Fabrication of Ultrathin Silicon Insertion Shuttles for Flexible Neural Implants", 2023 IEEE 36th International Conference on Micro Electro Mechanical Systems Conference (MEMS), Jan. 15-19 2023, Munich, Germany, pp. 421-424, doi: 10.1109/MEMS49605.2023.10052581.

6. Boehler, C., Vomero, M., Soula, M., Vöröslakos, M., Porto Cruz, M., Liljemalm, R., Buzsaki, G., Stieglitz, T., Asplund, M. "Multilayer Arrays for Neurotechnology Applications (MANTA): Chronically Stable Thin-Film Intracortical Implants”. Advanced Science, 2023, 2207576, doi.org/10.1002/advs.202207576.

7. Raducanu, B., Aymerich, J., Hsu, W. Y., Hendrickx, P., & Mora Lopez, C. "128-channel neural stimulation and recording ASIC for scalable cortical visual prosthesis", IEEE 49th European Solid-State Circuits Conference, 2023.

8. Mohamed, H., Raducanu, B., Kiselev, I., Wang, Z., Küçükoğlu, B., Rueckauer, B., van Gerven, M., Mora Lopez, C., Liu, S-C. “A 128-channel real-time VPDNN stimulation system for a visual cortical neuroprosthesis”, IEEE Biomedical Circuits and Systems (BIOCAS), 2023.

2022

1. Chen, X.*, Morales-Gregorio, A.*, Sridhar, S., Sprenger, J., van Albada, S. J., Grün, S., Roelfsema, P. "1024-channel electrophysiological recordings in macaque V1 and V4 during resting state", Sci Data 9, 77, 2022, doi: 10.1038/s41597-022-01180-1. 

2. Küçükoğlu, B., Rueckauer, B., Ahmad, N., van Steveninck, J. R., Güçlü, U., and van Gerven, M. "Optimization of Neuroprosthetic Vision via End-to-end Deep Reinforcement Learning", International Journal of Neural Systems, 32(11), 2250052, 2022, doi: 10.1142/S0129065722500526.

3. Küçükoğlu, B., Borkent, W., Rueckauer, B., Ahmad, N., Güçlü, U., & van Gerven, M. "Efficient Deep Reinforcement Learning with Predictive Processing Proximal Policy Optimization", arXiv preprint arXiv:2211.06236, 2022. doi: doi.org/10.48550/arXiv.2211.06236.

4. Otte, E., Vlachos, A., Asplund, M. “Engineering strategies towards overcoming bleeding and glial scar formation around neural probes”, Cell Tissue Res 387, 461–477, 2022, doi: 10.1007/s00441-021-03567-9. 

5. Hadorn, J.*, Wang, Z.*, Rueckauer, B., Chen, X., Roelfsema, P., Liu, S.-C. "Fast temporal decoding from large-scale neural recordings in monkey visual cortex", NeurIPS 2022 Workshop on Shared Visual Representations in Human & Machine Intelligence (SVRHM Workshop), Dec 2, 2022.

6. Rueckauer, B. and van Gerven, M. "Experiencing Prosthetic Vision with Event-Based Sensors", Proceedings of the International Conference on Neuromorphic Systems, 2022, doi: 10.1145/3546790.3546813.

7. van der Grinten, M. L., de Ruyter van Steveninck, J., Lozano, A., Pijnacker, L., Rueckauer, B., Roelfsema, P., van Gerven, M., van Wezel, R., Güçlü, U., Güçlütürk, Y. "Biologically plausible phosphene simulation for the differentiable optimization of visual cortical prostheses", bioRxiv, 2022, under review, doi: 10.1101/2022.12.23.521749.

8. Grani, F., Soto-Sánchez, C., Fimia, A., & Fernández, E. "Toward a personalized closed-loop stimulation of the visual cortex: Advances and challenges", Frontiers in Cellular Neuroscience, 16, 1034270, 2022, doi:10.3389/fncel.2022.1034270.

9. Grani, F., Soto-Sánchez, C., Farfan, F. D., Alfaro, A., Grima, M. D., Doblado, A. R., & Fernández, E. “Time stability and connectivity analysis with an intracortical 96-channel microelectrode array inserted in human visual cortex”. Journal of Neural Engineering, 19(4), 045001, 2022, doi: 10.1088/1741-2552/ac801d.

2021

1. Fernandez, E., Alfaro, A., Soto-Sanchez, C., Gonzalez-Lopez, P., Lozano, A., Peña, S., Rodil, A., Gomez, B., Chez, X., Roefsema, P., Rolston, J., Davis, T., Normann, RA. "Visual percepts evoked with an intracortical 96-channel microelectrode array inserted in human occipital cortex", The Journal of Clinical Investigation 131.23, 2021, doi.org/10.1172/JCI151331.

2. Wang, H., Mohamed, H., Wang, Z., Rueckauer, B., Liu, S.-C. “LiteEdge: Lightweight Semantic Edge Detection Network”, Proceedings of the IEEE/CVF International Conference on Computer Vision (ICCV) Workshops, 2021.

Related publications

Aimar, A. et al. (2019) ‘NullHop: A Flexible Convolutional Neural Network Accelerator Based on Sparse Representations of Feature Maps’, IEEE Transactions on Neural Networks and Learning Systems, 30(3), pp. 644–656.

Bahramisharif, A. and Van Gerven, M. (2010) ‘Covert attention allows for continuous control of brain–computer interfaces’, European Journal of. Available at: https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1460-9568.2010.07174.x.

Barz, F. et al. (2020) ‘CMOS-Compatible, Flexible, Intracortical Neural Probes’, IEEE Transactions on Bio-medical Engineering, 67(5), pp. 1366–1376.

Boehler, C. et al. (2020) ‘Tutorial: guidelines for standardized performance tests for electrodes intended for neural interfaces and bioelectronics’, Nature protocols. doi: 10.1038/s41596-020-0389-2.

Chen, X. et al. (2020) ‘Shape perception via a high-channel-count neuroprosthesis in monkey visual cortex’, Science, 370(6521), pp. 1191–1196.

Gao, C. et al. (2018) ‘DeltaRNN: A Power-efficient Recurrent Neural Network Accelerator’, in Proceedings of the 2018 ACM/SIGDA International Symposium on Field-Programmable Gate Arrays. New York, NY, USA: Association for Computing Machinery (FPGA ’18), pp. 21–30.

Gao, C. et al. (2020) ‘Recurrent Neural Network Control of a Hybrid Dynamical Transfemoral Prosthesis with EdgeDRNN Accelerator’, 2020 IEEE International Conference on Robotics and Automation (ICRA). doi: 10.1109/icra40945.2020.9196984.

Güçlü, U. and van Gerven, M. A. J. (2015) ‘Deep Neural Networks Reveal a Gradient in the Complexity of Neural Representations Across the Ventral Stream’, Journal of Neuroscience, 35(27), pp. 10005–10014.

Güçlü, U. and van Gerven, M. A. J. (2016) ‘Modeling the dynamics of human brain activity with recurrent neural networks’, Frontiers in systems neuroscience, pp. 1–19.

Schoenmakers, S. et al. (2013) ‘Linear reconstruction of perceived images from human brain activity’, NeuroImage. Available at: https://www.sciencedirect.com/science/article/pii/S1053811913007994.